Index

_

__init__() (BaseForce method) (BaseHarmonicForce method) (Interpolator method) (Simulator method) (VariableCenterHarmonicForce method) (VariableStiffnessCenterHarmonicForce method) (VariableStiffnessHarmonicForce method) (VariableStiffnessHarmonicForcePolynomial method)

B

BaseForce (class in langesim_optim.simulator_forces)

BaseHarmonicForce (class in langesim_optim.simulator_forces)

C

center() (BaseHarmonicForce method) (VariableCenterHarmonicForce method)

char_fn() (in module langesim_optim.loss_functions)

F

force() (BaseForce method) (BaseHarmonicForce method)

forward() (BaseForce method) (Simulator method) FT_pdf() (in module langesim_optim.loss_functions)

G

gaussian() (in module langesim_optim.loss_functions)

I

interpolate() (in module langesim_optim.interpolator)

Interpolator (class in langesim_optim.interpolator)

K

k_from_sim() (in module langesim_optim.utilities) kappa() (BaseHarmonicForce method) (VariableCenterHarmonicForce method) (VariableStiffnessHarmonicForce method) (VariableStiffnessHarmonicForcePolynomial method)

L

loss_fn_control_k_vars() (in module langesim_optim.loss_functions) loss_fn_eq_work() (in module langesim_optim.loss_functions) loss_fn_grad_k() (in module langesim_optim.loss_functions)

loss_fn_k() (in module langesim_optim.loss_functions) loss_fn_mean() (in module langesim_optim.loss_functions) loss_fn_variance() (in module langesim_optim.loss_functions) loss_fn_work() (in module langesim_optim.loss_functions)

M

make_interpolator() (in module langesim_optim.interpolator)

P

plot_protocols() (in module langesim_optim.utilities) plot_test_hist() (in module langesim_optim.utilities)

potential() (BaseForce method) (BaseHarmonicForce method)

S

Simulator (class in langesim_optim.simulator_forces)

T

train_loop() (in module langesim_optim.utilities)

train_loop_snapshots() (in module langesim_optim.utilities)

V

validate_init_interpolation_list() (in module langesim_optim.simulator_forces) VariableCenterHarmonicForce (class in langesim_optim.simulator_forces)

VariableStiffnessCenterHarmonicForce (class in langesim_optim.simulator_forces) VariableStiffnessHarmonicForce (class in langesim_optim.simulator_forces) VariableStiffnessHarmonicForcePolynomial (class in langesim_optim.force_harmonic_polynomial)